Hi Dominique,
All that the statement you referenced is saying is that the quantum state of the first qubit, q[0], is in a superposition of 4 states: |0>, |0>, |1>, |1>. This is simply abbreviated for ease of reading to |0011>.
You are right that that the entire state must be considered as a whole. This is precisely the mega-qubit.
Hope this helps.
Regards,
Nihal